Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901634.1_cds_XP_016451673.1_45995
CDS Infomation

[gene=LOC107776309] [db_xref=GeneID:107776309] [protein=probable beta-D-xylosidase 7] [protein_id=XP_016451673.1] [location=join(8405..8794,9313..9615,11839..12008,12097..12194,13096..13860,13957..14549)] [gbkey=CDS]
Sequence

ATGAAACTTGACACTTTAGCTACACTCCTATGGCTAACACTCATTTCAACAACTGAGTCA
ACTCAGCCACCTTTCTCCTGTGACTCGTCTCTTCCTCTAACCAAATCCCTAAAGTTCTGC
CAATCAGCTCTTCCCATCAGTGTACGTGCAAAGGACCTTGTCTCTCGACTAACACTAGAT
GAAAAGATTTCCCAACTCGTTAACTCTGCTCCGGCGATTCCAAGACTCGGTATTCCGGCT
TACGAGTGGTGGTCGGAGTCTCTTCACGGCGTTGGAGCTGCCGGAAGAGGTATTTTCTTC
AATGGGAGTATCAATGGAGCCACCAGCTTTCCTCAAGTTATTCTCACTGCTGCTTCTTTT
GATGAAAACCTTTGGTATCGCATTGGCCAGGTGATAGGAAGAGAGGCAAGGGGAGTGTAC
AATGCAGGAGAAGCAGTAGGGATGACATTTTGGGCACCAAATATAAATATATTTAGGGAC
CCAAGATGGGGAAGAGGGCAAGAAACAGCAGGGGAGGACCCAACTATGACTGGTAAATAT
GCAATACGGTACGTGAGAGGAGTACAAGGTGACAGTTTTGAAGGTGGAAAACTCAAGAAA
GGTCACCTTCAAGCTTCTGCTTGCTGCAAACATTTCACTGCTTATGACTTGGATCAATGG
AAAACCTTGGATCGCTTTAGTTTCAATGCCATTGTGACCCCTCAAGATATGGCAGATACA
TTTCAGCCCCCTTTCCAAGATTGCATACAAAAAGCACAAGCTAGTGGAATAATGTGCTCT
TACAACAGTGTTAATGGCATTCCAAGTTGTGCTAATTACAATCTTTTGACAAAAACGGCT
CGTCAACAATGGGGTTTTCATGGGTACATCACATCCGACTGTGATGCAGTGCAAGTTATG
CATGACAATCACAAGTATGCCAAGACACCAGAAGATGCAGCTGCATTTGCACTTAAAGCT
GGCATGGATGTAAATTGTGGGGATTACTTAAGGAAATACACAAAATCAGCAATAATGCAG
AAAAAGGTTTCAGAAGCTCATGTAGACAGGGCTCTTCACAATCTTTTCTCTATTAGAATG
AGGTTAGGACTATTCAATGGCAACCCAACAAAACAGCTCTTTGGAAACATTAGTCCTAAC
CTGGTTTGTGCTCAACAACATCAAGAACTAGCCCTTGAAGCTGCAAGAAGTGGCATTGTC
TTGCTCAAGAACACTGGCAAACTCCTTCCTCTTTCCAAGGCTAAAACCAATTCCCTTGCT
GTCATTGGTCCTAATGCCAACAGTGCTTATGTTCTTCGTGGAAACTATGACGGTCCTCCT
TGCAAATCTATCGAGATTCTTAAGGCATTGTCGGGTTATGTGAAGACAGTGCAATACCAC
CCGGGCTGCTATGCAGTTAACTGCACGTCTGTTGCCATTGATCAAGCTGTCAACGCTGCA
AAGAATGTGGATTACGTCGTTTTGGTCATGGGGTTGGATCAAGGTCAAGAGAGGGAACAA
TTTGATCGCGATGACTTGGTGCTCCCGGGGCAGCAAGAAAAACTCATTACTAGTGTTGCT
AAAGCTGCAAAGAAGCCTGTTATATTGGTACTACTCTCTGGAGGTCCAGTCGATGTTTCT
TTCGCGAAAATCAACCCCAAAATAGGAAGTATTTTGTGGGCTGGCTATCCTGGTGAAGCT
GGTGGACTTGCTTTATCTGAAATTATATTCGGTGAACATAATCCTGGAGGTAAATTACCT
ATTACTTGGTATCCTCAAGACTTTGTCAAAATACCAATGACAGACATGAGGATGAGACCT
AATCCAGCAACAGGCTACCCTGGTAGAACATATCGATTCTACAAGGGTCCCAAAGTTTTC
GAGTTTGGCTATGGTCTTAGTTACACAACCTATTCCTATGAGTTCAACTCTGCCACTCCT
AAAACAGTTCAGCTAAATCAATTATCAACCGCAAAGACAGTTCAAGATTCGGATTCAATC
CGTTACGTGTCTGTGGAAGAAATGGGAATAGACAACTGTGAGAAGGCAAAATTCTCAGCT
CATGTTAGTGTCAAAAACTCAGGGGAAATGGATGGTAAGCACCCCGTACTACTTTTTGTG
AAGCAGGACGACAAAGTTCAAAATGGAAGTCCTGTAAAACAGCTAGTTGGATTCCAGAGT
GTGAGCTTAAAGGCAGGAGAAAATTCTGAAATTGTGTTTGAGATCAGTCCTTGTGAACAT
CTTAGCAGTGCTAATGAGGATGGATTAACGATGATAGAAGAAGGGTCTCGTTACCTTGTC
GTTGGCGATGCAGAACACCCCATTAACATCATGATCTGA

Peptide Sequence

PEP ID

XP_016451673.1
PEP Infomation

PREDICTED: probable beta-D-xylosidase 7 [Nicotiana tabacum]
Sequence

MKLDTLATLLWLTLISTTESTQPPFSCDSSLPLTKSLKFCQSALPISVRAKDLVSRLTLD
EKISQLVNSAPAIPRLGIPAYEWWSESLHGVGAAGRGIFFNGSINGATSFPQVILTAASF
DENLWYRIGQVIGREARGVYNAGEAVGMTFWAPNINIFRDPRWGRGQETAGEDPTMTGKY
AIRYVRGVQGDSFEGGKLKKGHLQASACCKHFTAYDLDQWKTLDRFSFNAIVTPQDMADT
FQPPFQDCIQKAQASGIMCSYNSVNGIPSCANYNLLTKTARQQWGFHGYITSDCDAVQVM
HDNHKYAKTPEDAAAFALKAGMDVNCGDYLRKYTKSAIMQKKVSEAHVDRALHNLFSIRM
RLGLFNGNPTKQLFGNISPNLVCAQQHQELALEAARSGIVLLKNTGKLLPLSKAKTNSLA
VIGPNANSAYVLRGNYDGPPCKSIEILKALSGYVKTVQYHPGCYAVNCTSVAIDQAVNAA
KNVDYVVLVMGLDQGQEREQFDRDDLVLPGQQEKLITSVAKAAKKPVILVLLSGGPVDVS
FAKINPKIGSILWAGYPGEAGGLALSEIIFGEHNPGGKLPITWYPQDFVKIPMTDMRMRP
NPATGYPGRTYRFYKGPKVFEFGYGLSYTTYSYEFNSATPKTVQLNQLSTAKTVQDSDSI
RYVSVEEMGIDNCEKAKFSAHVSVKNSGEMDGKHPVLLFVKQDDKVQNGSPVKQLVGFQS
VSLKAGENSEIVFEISPCEHLSSANEDGLTMIEEGSRYLVVGDAEHPINIMI

Transcript Sequence

Gene sequence data has not been registered.